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Pyrimidine nucleosides

Pyrimidine nucleosides

One-carbon nitrogen ring bases (thymine and cytosine covalently linked to a sugar (ribose or deoxyribose); can function as extracellular messengers, antimetabolites, and chain terminators that inhibit viral DNA polymerase.
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1 – 15 of 53 results
1

Thermo Scientific Chemicals (+)-5-Fluoro-2'-deoxyuridine, 99+%

CAS: 50-91-9 Molecular Formula: C9H11FN2O5 Molecular Weight (g/mol): 246.19 MDL Number: MFCD00006530 InChI Key: ODKNJVUHOIMIIZ-RRKCRQDMSA-N Synonym: floxuridine,2'-deoxy-5-fluorouridine,5-fluoro-2'-deoxyuridine,5-fluorodeoxyuridine,fluorodeoxyuridine,floxuridin,fudr,deoxyfluorouridine,fluoruridine deoxyribose,fdurd PubChem CID: 5790 ChEBI: CHEBI:60761 IUPAC Name: 5-fluoro-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione SMILES: OC[C@H]1O[C@H](C[C@@H]1O)N1C=C(F)C(=O)NC1=O

PubChem CID 5790
CAS 50-91-9
Molecular Weight (g/mol) 246.19
ChEBI CHEBI:60761
MDL Number MFCD00006530
SMILES OC[C@H]1O[C@H](C[C@@H]1O)N1C=C(F)C(=O)NC1=O
Synonym floxuridine,2'-deoxy-5-fluorouridine,5-fluoro-2'-deoxyuridine,5-fluorodeoxyuridine,fluorodeoxyuridine,floxuridin,fudr,deoxyfluorouridine,fluoruridine deoxyribose,fdurd
IUPAC Name 5-fluoro-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione
InChI Key ODKNJVUHOIMIIZ-RRKCRQDMSA-N
Molecular Formula C9H11FN2O5
2

Gemcitabine, 98%, Thermo Scientific Chemicals

CAS: 95058-81-4 Molecular Formula: C9H11F2N3O4 Molecular Weight (g/mol): 263.2 InChI Key: SDUQYLNIPVEERB-QPPQHZFASA-N Synonym: gemcitabine,2',2'-difluorodeoxycytidine,gemcitabinum,gamcitabine,gemcitabina,gemcitabine hcl,dfdc,2'-deoxy-2',2'-difluorocytidine,folfugem,gemcel PubChem CID: 60750 ChEBI: CHEBI:175901 IUPAC Name: 4-amino-1-[(2R,4R,5R)-3,3-difluoro-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one SMILES: C1=CN(C(=O)N=C1N)C2C(C(C(O2)CO)O)(F)F

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PubChem CID 60750
CAS 95058-81-4
Molecular Weight (g/mol) 263.2
ChEBI CHEBI:175901
SMILES C1=CN(C(=O)N=C1N)C2C(C(C(O2)CO)O)(F)F
Synonym gemcitabine,2',2'-difluorodeoxycytidine,gemcitabinum,gamcitabine,gemcitabina,gemcitabine hcl,dfdc,2'-deoxy-2',2'-difluorocytidine,folfugem,gemcel
IUPAC Name 4-amino-1-[(2R,4R,5R)-3,3-difluoro-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one
InChI Key SDUQYLNIPVEERB-QPPQHZFASA-N
Molecular Formula C9H11F2N3O4
3

5-Fluoro-2'-deoxyuridine, 98+%, Thermo Scientific Chemicals

CAS: 50-91-9 Molecular Formula: C9H11FN2O5 Molecular Weight (g/mol): 246.19 MDL Number: MFCD00006530 InChI Key: ODKNJVUHOIMIIZ-RRKCRQDMSA-N Synonym: floxuridine,2'-deoxy-5-fluorouridine,5-fluoro-2'-deoxyuridine,5-fluorodeoxyuridine,fluorodeoxyuridine,floxuridin,fudr,deoxyfluorouridine,fluoruridine deoxyribose,fdurd PubChem CID: 5790 ChEBI: CHEBI:60761 IUPAC Name: 5-fluoro-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione SMILES: OC[C@H]1O[C@H](C[C@@H]1O)N1C=C(F)C(=O)NC1=O

PubChem CID 5790
CAS 50-91-9
Molecular Weight (g/mol) 246.19
ChEBI CHEBI:60761
MDL Number MFCD00006530
SMILES OC[C@H]1O[C@H](C[C@@H]1O)N1C=C(F)C(=O)NC1=O
Synonym floxuridine,2'-deoxy-5-fluorouridine,5-fluoro-2'-deoxyuridine,5-fluorodeoxyuridine,fluorodeoxyuridine,floxuridin,fudr,deoxyfluorouridine,fluoruridine deoxyribose,fdurd
IUPAC Name 5-fluoro-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione
InChI Key ODKNJVUHOIMIIZ-RRKCRQDMSA-N
Molecular Formula C9H11FN2O5
4

Brivudine, 98%, Thermo Scientific Chemicals

CAS: 69304-47-8 Molecular Formula: C11H13BrN2O5 Molecular Weight (g/mol): 333.14 MDL Number: MFCD00058585 InChI Key: ODZBBRURCPAEIQ-PIXDULNESA-N Synonym: brivudine,bvdu,brivudin,helpin,e-5-2-bromovinyl-2'-deoxyuridine,bromovinyldeoxyuridine,zostex,brivudine inn,brivudinum inn-latin,brivudina inn-spanish PubChem CID: 446727 IUPAC Name: 5-[(E)-2-bromoethenyl]-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione SMILES: OC[C@H]1O[C@H](C[C@@H]1O)N1C=C(\C=C\Br)C(=O)NC1=O

PubChem CID 446727
CAS 69304-47-8
Molecular Weight (g/mol) 333.14
MDL Number MFCD00058585
SMILES OC[C@H]1O[C@H](C[C@@H]1O)N1C=C(\C=C\Br)C(=O)NC1=O
Synonym brivudine,bvdu,brivudin,helpin,e-5-2-bromovinyl-2'-deoxyuridine,bromovinyldeoxyuridine,zostex,brivudine inn,brivudinum inn-latin,brivudina inn-spanish
IUPAC Name 5-[(E)-2-bromoethenyl]-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione
InChI Key ODZBBRURCPAEIQ-PIXDULNESA-N
Molecular Formula C11H13BrN2O5
5

Thermo Scientific Chemicals 2'-Deoxyuridine, 98+%, Thermo Scientific Chemicals

CAS: 951-78-0 Molecular Formula: C9H12N2O5 Molecular Weight (g/mol): 228.20 MDL Number: MFCD00006527 InChI Key: MXHRCPNRJAMMIM-SHYZEUOFSA-N Synonym: 2'-deoxyuridine,deoxyuridine,uracil deoxyriboside,2-deoxyuridine,1-2r,4s,5r-4-hydroxy-5-hydroxymethyl tetrahydrofuran-2-yl pyrimidine-2,4 1h,3h-dione,deoxyribose uracil,uridine, 2'-deoxy,2'-desoxyuridine,unii-w78i7ay22c,ccris 2832 PubChem CID: 13712 ChEBI: CHEBI:16450 IUPAC Name: 1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione SMILES: OC[C@H]1O[C@H](C[C@@H]1O)N1C=CC(=O)NC1=O

PubChem CID 13712
CAS 951-78-0
Molecular Weight (g/mol) 228.20
ChEBI CHEBI:16450
MDL Number MFCD00006527
SMILES OC[C@H]1O[C@H](C[C@@H]1O)N1C=CC(=O)NC1=O
Synonym 2'-deoxyuridine,deoxyuridine,uracil deoxyriboside,2-deoxyuridine,1-2r,4s,5r-4-hydroxy-5-hydroxymethyl tetrahydrofuran-2-yl pyrimidine-2,4 1h,3h-dione,deoxyribose uracil,uridine, 2'-deoxy,2'-desoxyuridine,unii-w78i7ay22c,ccris 2832
IUPAC Name 1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione
InChI Key MXHRCPNRJAMMIM-SHYZEUOFSA-N
Molecular Formula C9H12N2O5
6

N-Benzoyl-2'-deoxycytidine, 98+%, Thermo Scientific Chemicals

CAS: 4836-13-9 Molecular Formula: C16H17N3O5 Molecular Weight (g/mol): 331.33 MDL Number: MFCD00010115 InChI Key: MPSJHJFNKMUKCN-OUCADQQQSA-N Synonym: n4-benzoyl-2'-deoxycytidine,n-benzoyl-2'-deoxy-cytidine,n-benzoyl-2'-deoxycytidine,cytidine, n-benzoyl-2'-deoxy,cytidine,n-benzoyl-2'-deoxy,n-benzoyl-2-deoxy-cytidine,dc-bz,ksc590o7t,n-benzoyl-2/'-deoxycytidine PubChem CID: 9797617 IUPAC Name: N-[1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-2-oxopyrimidin-4-yl]benzamide SMILES: OC[C@H]1O[C@H](C[C@@H]1O)N1C=CC(NC(=O)C2=CC=CC=C2)=NC1=O

PubChem CID 9797617
CAS 4836-13-9
Molecular Weight (g/mol) 331.33
MDL Number MFCD00010115
SMILES OC[C@H]1O[C@H](C[C@@H]1O)N1C=CC(NC(=O)C2=CC=CC=C2)=NC1=O
Synonym n4-benzoyl-2'-deoxycytidine,n-benzoyl-2'-deoxy-cytidine,n-benzoyl-2'-deoxycytidine,cytidine, n-benzoyl-2'-deoxy,cytidine,n-benzoyl-2'-deoxy,n-benzoyl-2-deoxy-cytidine,dc-bz,ksc590o7t,n-benzoyl-2/'-deoxycytidine
IUPAC Name N-[1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-2-oxopyrimidin-4-yl]benzamide
InChI Key MPSJHJFNKMUKCN-OUCADQQQSA-N
Molecular Formula C16H17N3O5
7

Gemcitabine hydrochloride, 98%, Thermo Scientific Chemicals

CAS: 122111-03-9 Molecular Formula: C9H12ClF2N3O4 Molecular Weight (g/mol): 299.66 InChI Key: OKKDEIYWILRZIA-OSZBKLCCSA-N IUPAC Name: hydrogen 4-amino-1-[(2R,4R,5R)-3,3-difluoro-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,2-dihydropyrimidin-2-one chloride SMILES: [H+].[Cl-].NC1=NC(=O)N(C=C1)[C@@H]1O[C@H](CO)[C@@H](O)C1(F)F

CAS 122111-03-9
Molecular Weight (g/mol) 299.66
SMILES [H+].[Cl-].NC1=NC(=O)N(C=C1)[C@@H]1O[C@H](CO)[C@@H](O)C1(F)F
IUPAC Name hydrogen 4-amino-1-[(2R,4R,5R)-3,3-difluoro-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,2-dihydropyrimidin-2-one chloride
InChI Key OKKDEIYWILRZIA-OSZBKLCCSA-N
Molecular Formula C9H12ClF2N3O4
8

Thermo Scientific Chemicals Thymidine, 99+%

CAS: 50-89-5 Molecular Formula: C10H14N2O5 Molecular Weight (g/mol): 242.23 InChI Key: IQFYYKKMVGJFEH-UHFFFAOYNA-N Synonym: thymidine,deoxythymidine,2'-deoxythymidine,5-methyldeoxyuridine,thymidin,beta-thymidine,dthyd,5-methyl-2'-deoxyuridine,thymine-2-deoxyriboside,thyminedeoxyriboside PubChem CID: 5789 ChEBI: CHEBI:17748 IUPAC Name: 1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione SMILES: CC1=CN(C2CC(O)C(CO)O2)C(=O)NC1=O

PubChem CID 5789
CAS 50-89-5
Molecular Weight (g/mol) 242.23
ChEBI CHEBI:17748
SMILES CC1=CN(C2CC(O)C(CO)O2)C(=O)NC1=O
Synonym thymidine,deoxythymidine,2'-deoxythymidine,5-methyldeoxyuridine,thymidin,beta-thymidine,dthyd,5-methyl-2'-deoxyuridine,thymine-2-deoxyriboside,thyminedeoxyriboside
IUPAC Name 1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione
InChI Key IQFYYKKMVGJFEH-UHFFFAOYNA-N
Molecular Formula C10H14N2O5
9

3'-Azido-3'-deoxythymidine, 98%, Thermo Scientific Chemicals

CAS: 30516-87-1 Molecular Formula: C10H13N5O4 Molecular Weight (g/mol): 267.25 MDL Number: MFCD00006536 InChI Key: HBOMLICNUCNMMY-CFQLRCIDNA-N Synonym: azt; azidothymidine; zdv; zidovudine,1-2r-4-azido-5-hydroxymethyl oxolan-2-yl-5-methyl-3h-pyrimidine-2,4-dione PubChem CID: 455007 IUPAC Name: 1-[(2R,5S)-4-azido-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione SMILES: CC1=CN([C@H]2C[C@H](N=[N+]=[N-])[C@@H](CO)O2)C(=O)NC1=O

PubChem CID 455007
CAS 30516-87-1
Molecular Weight (g/mol) 267.25
MDL Number MFCD00006536
SMILES CC1=CN([C@H]2C[C@H](N=[N+]=[N-])[C@@H](CO)O2)C(=O)NC1=O
Synonym azt; azidothymidine; zdv; zidovudine,1-2r-4-azido-5-hydroxymethyl oxolan-2-yl-5-methyl-3h-pyrimidine-2,4-dione
IUPAC Name 1-[(2R,5S)-4-azido-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione
InChI Key HBOMLICNUCNMMY-CFQLRCIDNA-N
Molecular Formula C10H13N5O4
10

Trifluorothymidine, 98%, Thermo Scientific Chemicals

CAS: 70-00-8 Molecular Formula: C10H11F3N2O5 Molecular Weight (g/mol): 296.20 MDL Number: MFCD00006534 InChI Key: VSQQQLOSPVPRAZ-RRKCRQDMSA-N Synonym: trifluridine,trifluorothymidine,viroptic,5-trifluorothymidine,trifluridina,trifluridinum,virophta,trifluoromethyldeoxyuridine,f3tdr,f3dthd PubChem CID: 6256 ChEBI: CHEBI:75179 IUPAC Name: 1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-(trifluoromethyl)pyrimidine-2,4-dione SMILES: OC[C@H]1O[C@H](C[C@@H]1O)N1C=C(C(=O)NC1=O)C(F)(F)F

PubChem CID 6256
CAS 70-00-8
Molecular Weight (g/mol) 296.20
ChEBI CHEBI:75179
MDL Number MFCD00006534
SMILES OC[C@H]1O[C@H](C[C@@H]1O)N1C=C(C(=O)NC1=O)C(F)(F)F
Synonym trifluridine,trifluorothymidine,viroptic,5-trifluorothymidine,trifluridina,trifluridinum,virophta,trifluoromethyldeoxyuridine,f3tdr,f3dthd
IUPAC Name 1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-(trifluoromethyl)pyrimidine-2,4-dione
InChI Key VSQQQLOSPVPRAZ-RRKCRQDMSA-N
Molecular Formula C10H11F3N2O5
11

Thermo Scientific Chemicals 2'-Deoxycytidine

CAS: 951-77-9 Molecular Formula: C9H13N3O4 Molecular Weight (g/mol): 227.22 MDL Number: MFCD00006547 InChI Key: CKTSBUTUHBMZGZ-JORGKRSHNA-N Synonym: 2'-deoxycytidine,deoxycytidine,dcyd,cytosine deoxyriboside,cytidine, 2'-deoxy,deoxyribose cytidine,desoxycytidin german,4-amino-1-2r,4s,5r-4-hydroxy-5-hydroxymethyl tetrahydrofuran-2-yl pyrimidin-2 1h-one,cytosine, deoxyribonucleoside,d-cytidine PubChem CID: 13711 ChEBI: CHEBI:15698 IUPAC Name: 4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one SMILES: NC1=NC(=O)N(C=C1)[C@H]1C[C@H](O)[C@@H](CO)O1

PubChem CID 13711
CAS 951-77-9
Molecular Weight (g/mol) 227.22
ChEBI CHEBI:15698
MDL Number MFCD00006547
SMILES NC1=NC(=O)N(C=C1)[C@H]1C[C@H](O)[C@@H](CO)O1
Synonym 2'-deoxycytidine,deoxycytidine,dcyd,cytosine deoxyriboside,cytidine, 2'-deoxy,deoxyribose cytidine,desoxycytidin german,4-amino-1-2r,4s,5r-4-hydroxy-5-hydroxymethyl tetrahydrofuran-2-yl pyrimidin-2 1h-one,cytosine, deoxyribonucleoside,d-cytidine
IUPAC Name 4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one
InChI Key CKTSBUTUHBMZGZ-JORGKRSHNA-N
Molecular Formula C9H13N3O4
14

Thermo Scientific Chemicals 3'-Deoxythymidine

CAS: 3416-05-5 Molecular Formula: C10H14N2O4 Molecular Weight (g/mol): 226.23 MDL Number: MFCD00010570 InChI Key: XKKCQTLDIPIRQD-JGVFFNPUSA-N Synonym: 3'-deoxythymidine,2',3'-dideoxythymidine,1-2r,5s-5-hydroxymethyl tetrahydrofuran-2-yl-5-methylpyrimidine-2,4 1h,3h-dione,dideoxythymidine,thymidine, 3'-deoxy,desoxythymidin,1-2r,5s-5-hydroxymethyl tetrahydrofuran-2-yl-5-methyl-pyrimidine-2,4-dione,ddt & gm-csf PubChem CID: 65119 IUPAC Name: 1-[(2R,5S)-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione SMILES: CC1=CN([C@H]2CC[C@@H](CO)O2)C(=O)NC1=O

PubChem CID 65119
CAS 3416-05-5
Molecular Weight (g/mol) 226.23
MDL Number MFCD00010570
SMILES CC1=CN([C@H]2CC[C@@H](CO)O2)C(=O)NC1=O
Synonym 3'-deoxythymidine,2',3'-dideoxythymidine,1-2r,5s-5-hydroxymethyl tetrahydrofuran-2-yl-5-methylpyrimidine-2,4 1h,3h-dione,dideoxythymidine,thymidine, 3'-deoxy,desoxythymidin,1-2r,5s-5-hydroxymethyl tetrahydrofuran-2-yl-5-methyl-pyrimidine-2,4-dione,ddt & gm-csf
IUPAC Name 1-[(2R,5S)-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione
InChI Key XKKCQTLDIPIRQD-JGVFFNPUSA-N
Molecular Formula C10H14N2O4
15

5'-O-(tert-Butyldimethylsilyl)thymidine, 97+%, Thermo Scientific Chemicals

CAS: 40733-28-6 Molecular Formula: C16H28N2O5Si Molecular Weight (g/mol): 356.49 MDL Number: MFCD01631041 InChI Key: IJWIJLIIOKZJMS-YNEHKIRRSA-N Synonym: 1-2s,4r,5s-5-tert-butyldimethylsilyl oxy methyl-4-hydroxyoxolan-2-yl-5-methyl-3h-pyrimidine-2,4-dione PubChem CID: 44717046 SMILES: CC1=CN([C@H]2C[C@H](O)[C@@H](CO[Si](C)(C)C(C)(C)C)O2)C(=O)NC1=O

PubChem CID 44717046
CAS 40733-28-6
Molecular Weight (g/mol) 356.49
MDL Number MFCD01631041
SMILES CC1=CN([C@H]2C[C@H](O)[C@@H](CO[Si](C)(C)C(C)(C)C)O2)C(=O)NC1=O
Synonym 1-2s,4r,5s-5-tert-butyldimethylsilyl oxy methyl-4-hydroxyoxolan-2-yl-5-methyl-3h-pyrimidine-2,4-dione
InChI Key IJWIJLIIOKZJMS-YNEHKIRRSA-N
Molecular Formula C16H28N2O5Si